HL_9MTQ_049

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

9MTQ|1|1A|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MTQ_049 not in the Motif Atlas

Geometric match to HL_7RGU_005

Geometric discrepancy: 0.3773

The information below is about HL_7RGU_005

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

9MTQ|1|1A|C|2143
9MTQ|1|1A|U|2144
9MTQ|1|1A|C|2145
9MTQ|1|1A|C|2146
9MTQ|1|1A|G|2147
9MTQ|1|1A|G|2148

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains