HL_9MTQ_056

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MTQ_056 not in the Motif Atlas

Geometric match to HL_9DFE_056

Geometric discrepancy: 0.0773

The information below is about HL_9DFE_056

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

9MTQ|1|1A|C|2374
9MTQ|1|1A|G|2375
9MTQ|1|1A|A|2376
9MTQ|1|1A|A|2377
9MTQ|1|1A|A|2378
9MTQ|1|1A|G|2379

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 16

50S ribosomal protein L33

Chain 1S

50S ribosomal protein L18