HL_9MTQ_111

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GCUUGUC

Length

7 nucleotides

Bulged bases

9MTQ|1|2A|U|271|||K, 9MTQ|1|2A|U|271|||N

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MTQ_111 not in the Motif Atlas

Geometric match to HL_5J7L_200

Geometric discrepancy: 0.27

The information below is about HL_5J7L_200

Detailed Annotation

Other HL

Broad Annotation

Other HL

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

9MTQ|1|2A|G|271|||I
9MTQ|1|2A|C|271|||J
9MTQ|1|2A|U|271|||K
9MTQ|1|2A|U|271|||L
9MTQ|1|2A|G|271|||M
9MTQ|1|2A|U|271|||N
9MTQ|1|2A|C|271|||O

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 21

50S ribosomal protein L28

Chain 2I

50S ribosomal protein L9