HL_9MTQ_194

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GUUCGGC

Length

7 nucleotides

Bulged bases

9MTQ|1|2a|U|1136, 9MTQ|1|2a|C|1137, 9MTQ|1|2a|G|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MTQ_194 not in the Motif Atlas

Geometric match to HL_5J7L_156

Geometric discrepancy: 0.3168

The information below is about HL_5J7L_156

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

9MTQ|1|2a|G|1134
9MTQ|1|2a|U|1135
9MTQ|1|2a|U|1136
9MTQ|1|2a|C|1137
9MTQ|1|2a|G|1138
9MTQ|1|2a|G|1139
9MTQ|1|2a|C|1140

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains