HL_9MTS_009
3D structure
- PDB id
- 9MTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- UUGGGAAG
- Length
- 8 nucleotides
- Bulged bases
- 9MTS|1|1A|A|311
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9MTS_009 not in the Motif Atlas
- Geometric match to HL_9DFE_009
- Geometric discrepancy: 0.0716
- The information below is about HL_9DFE_009
- Detailed Annotation
- T-loop with 1 bulged base
- Broad Annotation
- T-loop
- Motif group
- HL_01609.3
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 18
Unit IDs
9MTS|1|1A|U|305
9MTS|1|1A|U|306
9MTS|1|1A|G|307
9MTS|1|1A|G|308
9MTS|1|1A|G|309
9MTS|1|1A|A|310
9MTS|1|1A|A|311
9MTS|1|1A|G|312
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1Y
- 50S ribosomal protein L24
Coloring options: