3D structure

PDB id
9N2B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.2 Å

Loop

Sequence
UUUA
Length
4 nucleotides
Bulged bases
9N2B|1|23|U|2797
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_9N2B_096 not in the Motif Atlas
Geometric match to HL_8P9A_196
Geometric discrepancy: 0.1535
The information below is about HL_8P9A_196
Detailed Annotation
Mini UNCG
Broad Annotation
No text annotation
Motif group
HL_48778.2
Basepair signature
cWW-F
Number of instances in this motif group
46

Unit IDs

9N2B|1|23|U|2796
9N2B|1|23|U|2797
9N2B|1|23|U|2798
9N2B|1|23|A|2799

Current chains

Chain 23
23S ribosomal RNA (rRNA) from the rrnB operon

Nearby chains

No other chains within 10Å

Coloring options:


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