HL_9N6Y_007

3D structure

PDB id

9N6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

UGAAACA

Length

7 nucleotides

Bulged bases

9N6Y|1|L0|C|430

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9N6Y_007 not in the Motif Atlas

Geometric match to HL_7QR0_003

Geometric discrepancy: 0.2139

The information below is about HL_7QR0_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

9N6Y|1|L0|U|425
9N6Y|1|L0|G|426
9N6Y|1|L0|A|427
9N6Y|1|L0|A|428
9N6Y|1|L0|A|429
9N6Y|1|L0|C|430
9N6Y|1|L0|A|431

Current chains

Chain L0

5'ETS rRNA

Nearby chains

Chain SD

rRNA 2'-O-methyltransferase fibrillarin

Chain SY

U3 small nucleolar RNA-associated protein 11