HL_9N78_024
3D structure
- PDB id
- 9N78 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State L
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.17 Å
Loop
- Sequence
- GUAAUU
- Length
- 6 nucleotides
- Bulged bases
- 9N78|1|L1|A|1555, 9N78|1|L1|U|1557
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9N78_024 not in the Motif Atlas
- Geometric match to HL_9BZC_001
- Geometric discrepancy: 0.3804
- The information below is about HL_9BZC_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89167.5
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 21
Unit IDs
9N78|1|L1|G|1553
9N78|1|L1|U|1554
9N78|1|L1|A|1555
9N78|1|L1|A|1556
9N78|1|L1|U|1557
9N78|1|L1|U|1558
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L3
- 40S ribosomal protein S18-A
- Chain NA
- U3 small nucleolar RNA-associated protein MPP10
- Chain SI
- Ribosome biogenesis protein BMS1
- Chain SY
- U3 small nucleolar RNA-associated protein 11
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