HL_9N7A_023

3D structure

PDB id

9N7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State N

Experimental method

ELECTRON MICROSCOPY

Resolution

3.84 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9N7A_023 not in the Motif Atlas

Homologous match to HL_9H3G_105

Geometric discrepancy: 0.1179

The information below is about HL_9H3G_105

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

456

Unit IDs

9N7A|1|L1|C|1501
9N7A|1|L1|G|1502
9N7A|1|L1|A|1503
9N7A|1|L1|G|1504
9N7A|1|L1|A|1505
9N7A|1|L1|G|1506

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L3

40S ribosomal protein S18-A

Chain NP

40S ribosomal protein S19-A