HL_9N7A_024

3D structure

PDB id

9N7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State N

Experimental method

ELECTRON MICROSCOPY

Resolution

3.84 Å

Loop

Sequence

GUAAUU

Length

6 nucleotides

Bulged bases

9N7A|1|L1|A|1555, 9N7A|1|L1|U|1557

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9N7A_024 not in the Motif Atlas

Geometric match to HL_9BZC_001

Geometric discrepancy: 0.389

The information below is about HL_9BZC_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89167.5

Basepair signature

cWW-F-F

Number of instances in this motif group

21

Unit IDs

9N7A|1|L1|G|1553
9N7A|1|L1|U|1554
9N7A|1|L1|A|1555
9N7A|1|L1|A|1556
9N7A|1|L1|U|1557
9N7A|1|L1|U|1558

Current chains

Chain L1

18S rRNA

Nearby chains

Chain NA

U3 small nucleolar RNA-associated protein MPP10

Chain SI

Ribosome biogenesis protein BMS1