HL_9NJF_072
3D structure
- PDB id
- 9NJF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pre-elongation complex without an A-site tRNA with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AGAAGCUUGCUUCU
- Length
- 14 nucleotides
- Bulged bases
- 9NJF|1|R3|G|79, 9NJF|1|R3|A|81, 9NJF|1|R3|C|83, 9NJF|1|R3|U|84, 9NJF|1|R3|U|85
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9NJF|1|R3|A|78
9NJF|1|R3|G|79
9NJF|1|R3|A|80
9NJF|1|R3|A|81
9NJF|1|R3|G|82
9NJF|1|R3|C|83
9NJF|1|R3|U|84
9NJF|1|R3|U|85
9NJF|1|R3|G|86
9NJF|1|R3|C|87
9NJF|1|R3|U|88
9NJF|1|R3|U|89
9NJF|1|R3|C|90
9NJF|1|R3|U|91
Current chains
- Chain R3
- 16S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: