HL_9NKL_026

3D structure

PDB id

9NKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGUUGGCUUAGAAGCAGCCAUCA

Length

23 nucleotides

Bulged bases

9NKL|1|R1|U|1061, 9NKL|1|R1|U|1065, 9NKL|1|R1|U|1066, 9NKL|1|R1|A|1067, 9NKL|1|R1|A|1070, 9NKL|1|R1|G|1074

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NKL|1|R1|U|1058
9NKL|1|R1|G|1059
9NKL|1|R1|U|1060
9NKL|1|R1|U|1061
9NKL|1|R1|G|1062
9NKL|1|R1|G|1063
9NKL|1|R1|C|1064
9NKL|1|R1|U|1065
9NKL|1|R1|U|1066
9NKL|1|R1|A|1067
9NKL|1|R1|G|1068
9NKL|1|R1|A|1069
9NKL|1|R1|A|1070
9NKL|1|R1|G|1071
9NKL|1|R1|C|1072
9NKL|1|R1|A|1073
9NKL|1|R1|G|1074
9NKL|1|R1|C|1075
9NKL|1|R1|C|1076
9NKL|1|R1|A|1077
9NKL|1|R1|U|1078
9NKL|1|R1|C|1079
9NKL|1|R1|A|1080

Current chains

Chain R1

23S ribosomal RNA

Nearby chains