HL_9NKL_028

3D structure

PDB id

9NKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGACGCUUAUGCGUUG

Length

16 nucleotides

Bulged bases

9NKL|1|R1|U|1173, 9NKL|1|R1|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NKL|1|R1|C|1167
9NKL|1|R1|G|1168
9NKL|1|R1|A|1169
9NKL|1|R1|C|1170
9NKL|1|R1|G|1171
9NKL|1|R1|C|1172
9NKL|1|R1|U|1173
9NKL|1|R1|U|1174
9NKL|1|R1|A|1175
9NKL|1|R1|U|1176
9NKL|1|R1|G|1177
9NKL|1|R1|C|1178
9NKL|1|R1|G|1179
9NKL|1|R1|U|1180
9NKL|1|R1|U|1181
9NKL|1|R1|G|1182

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 30

50S ribosomal protein L30