HL_9NKL_048
3D structure
- PDB id
- 9NKL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 9NKL|1|R1|A|2030, 9NKL|1|R1|A|2031, 9NKL|1|R1|G|2032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NKL_048 not in the Motif Atlas
- Homologous match to HL_5J7L_183
- Geometric discrepancy: 0.1106
- The information below is about HL_5J7L_183
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_61996.3
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9NKL|1|R1|G|2027
9NKL|1|R1|U|2028
9NKL|1|R1|G|2029
9NKL|1|R1|A|2030
9NKL|1|R1|A|2031
9NKL|1|R1|G|2032
9NKL|1|R1|A|2033
9NKL|1|R1|U|2034
9NKL|1|R1|G|2035
9NKL|1|R1|C|2036
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 21
- Large ribosomal subunit protein bL21
- Chain 3
- 50S ribosomal protein L3
- Chain 32
- 50S ribosomal protein L32
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