HL_9NKL_049

3D structure

PDB id

9NKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUUUGAAGUGUGGACGCCAGUCUGCAUGGAG

Length

31 nucleotides

Bulged bases

9NKL|1|R1|U|2132, 9NKL|1|R1|C|2145, 9NKL|1|R1|A|2147

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NKL|1|R1|C|2129
9NKL|1|R1|U|2130
9NKL|1|R1|U|2131
9NKL|1|R1|U|2132
9NKL|1|R1|G|2133
9NKL|1|R1|A|2134
9NKL|1|R1|A|2135
9NKL|1|R1|G|2136
9NKL|1|R1|U|2137
9NKL|1|R1|G|2138
9NKL|1|R1|U|2139
9NKL|1|R1|G|2140
9NKL|1|R1|G|2141
9NKL|1|R1|A|2142
9NKL|1|R1|C|2143
9NKL|1|R1|G|2144
9NKL|1|R1|C|2145
9NKL|1|R1|C|2146
9NKL|1|R1|A|2147
9NKL|1|R1|G|2148
9NKL|1|R1|U|2149
9NKL|1|R1|C|2150
9NKL|1|R1|U|2151
9NKL|1|R1|G|2152
9NKL|1|R1|C|2153
9NKL|1|R1|A|2154
9NKL|1|R1|U|2155
9NKL|1|R1|G|2156
9NKL|1|R1|G|2157
9NKL|1|R1|A|2158
9NKL|1|R1|G|2159

Current chains

Chain R1

23S ribosomal RNA

Nearby chains