HL_9NL5_081

3D structure

PDB id

9NL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAGUAAAGUUAAUACCUUUGCUC

Length

23 nucleotides

Bulged bases

9NL5|1|R3|G|462, 9NL5|1|R3|A|465, 9NL5|1|R3|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NL5|1|R3|G|455
9NL5|1|R3|A|456
9NL5|1|R3|G|457
9NL5|1|R3|U|458
9NL5|1|R3|A|459
9NL5|1|R3|A|460
9NL5|1|R3|A|461
9NL5|1|R3|G|462
9NL5|1|R3|U|463
9NL5|1|R3|U|464
9NL5|1|R3|A|465
9NL5|1|R3|A|466
9NL5|1|R3|U|467
9NL5|1|R3|A|468
9NL5|1|R3|C|469
9NL5|1|R3|C|470
9NL5|1|R3|U|471
9NL5|1|R3|U|472
9NL5|1|R3|U|473
9NL5|1|R3|G|474
9NL5|1|R3|C|475
9NL5|1|R3|U|476
9NL5|1|R3|C|477

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sp

Small ribosomal subunit protein bS16