HL_9NL5_087

3D structure

PDB id

9NL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCCUUGAGG

Length

9 nucleotides

Bulged bases

9NL5|1|R3|U|842, 9NL5|1|R3|G|844, 9NL5|1|R3|A|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NL5|1|R3|C|839
9NL5|1|R3|C|840
9NL5|1|R3|C|841
9NL5|1|R3|U|842
9NL5|1|R3|U|843
9NL5|1|R3|G|844
9NL5|1|R3|A|845
9NL5|1|R3|G|846
9NL5|1|R3|G|847

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sb

Small ribosomal subunit protein uS2

Chain sr

30S ribosomal protein S18