HL_9NL5_095

3D structure

PDB id

9NL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCAGCGGUCCGGCCGGG

Length

17 nucleotides

Bulged bases

9NL5|1|R3|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NL5|1|R3|C|1128
9NL5|1|R3|C|1129
9NL5|1|R3|A|1130
9NL5|1|R3|G|1131
9NL5|1|R3|C|1132
9NL5|1|R3|G|1133
9NL5|1|R3|G|1134
9NL5|1|R3|U|1135
9NL5|1|R3|C|1136
9NL5|1|R3|C|1137
9NL5|1|R3|G|1138
9NL5|1|R3|G|1139
9NL5|1|R3|C|1140
9NL5|1|R3|C|1141
9NL5|1|R3|G|1142
9NL5|1|R3|G|1143
9NL5|1|R3|G|1144

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain si

Small ribosomal subunit protein uS9