HL_9NL5_103
3D structure
- PDB id
- 9NL5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CCUAACAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NL5_103 not in the Motif Atlas
- Homologous match to HL_7VNV_002
- Geometric discrepancy: 0.1275
- The information below is about HL_7VNV_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 42
Unit IDs
9NL5|1|T|C|31
9NL5|1|T|C|32
9NL5|1|T|U|33
9NL5|1|T|A|34
9NL5|1|T|A|35
9NL5|1|T|C|36
9NL5|1|T|A|37
9NL5|1|T|A|38
9NL5|1|T|G|39
Current chains
- Chain T
- tRNA
Nearby chains
- Chain M
- mRNA
- Chain R3
- Small subunit ribosomal RNA; SSU rRNA
- Chain si
- Small ribosomal subunit protein uS9
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