HL_9NL6_021
3D structure
- PDB id
- 9NL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUUGAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 9NL6|1|R1|U|747, 9NL6|1|R1|A|751, 9NL6|1|R1|A|752
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NL6_021 not in the Motif Atlas
- Homologous match to HL_7A0S_022
- Geometric discrepancy: 0.1548
- The information below is about HL_7A0S_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
9NL6|1|R1|U|744
9NL6|1|R1|G|745
9NL6|1|R1|U|746
9NL6|1|R1|U|747
9NL6|1|R1|G|748
9NL6|1|R1|A|749
9NL6|1|R1|A|750
9NL6|1|R1|A|751
9NL6|1|R1|A|752
9NL6|1|R1|A|753
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 22
- Large ribosomal subunit protein uL22
- Chain 3
- 50S ribosomal protein L3
- Chain 32
- 50S ribosomal protein L32
- Chain 34
- 50S ribosomal protein L34
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