3D structure

PDB id
9NL6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CCUUCGGG
Length
8 nucleotides
Bulged bases
9NL6|1|R3|U|208, 9NL6|1|R3|U|209, 9NL6|1|R3|C|210
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9NL6|1|R3|C|206
9NL6|1|R3|C|207
9NL6|1|R3|U|208
9NL6|1|R3|U|209
9NL6|1|R3|C|210
9NL6|1|R3|G|211
9NL6|1|R3|G|212
9NL6|1|R3|G|213

Current chains

Chain R3
16S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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