HL_9NL7_028

3D structure

PDB id

9NL7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 2/PtIM(b) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGCUUAUGCG

Length

10 nucleotides

Bulged bases

9NL7|1|R1|A|1175, 9NL7|1|R1|U|1176

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NL7|1|R1|C|1170
9NL7|1|R1|G|1171
9NL7|1|R1|C|1172
9NL7|1|R1|U|1173
9NL7|1|R1|U|1174
9NL7|1|R1|A|1175
9NL7|1|R1|U|1176
9NL7|1|R1|G|1177
9NL7|1|R1|C|1178
9NL7|1|R1|G|1179

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 15

Large ribosomal subunit protein uL15