HL_9NL7_103
3D structure
- PDB id
- 9NL7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 2/PtIM(b) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- G(4OC)UCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 4OC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NL7_103 not in the Motif Atlas
- Homologous match to HL_9DFC_104
- Geometric discrepancy: 0.113
- The information below is about HL_9DFC_104
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
9NL7|1|T|G|31
9NL7|1|T|4OC|32
9NL7|1|T|U|33
9NL7|1|T|C|34
9NL7|1|T|A|35
9NL7|1|T|U|36
9NL7|1|T|A|37
9NL7|1|T|A|38
9NL7|1|T|C|39
Current chains
- Chain T
- tRNA
Nearby chains
- Chain M
- mRNA
- Chain R3
- Small subunit ribosomal RNA; SSU rRNA
- Chain si
- Small ribosomal subunit protein uS9
Coloring options: