HL_9NLB_077

3D structure

PDB id

9NLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAACUGAGACACGGUC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLB|1|R3|G|319
9NLB|1|R3|A|320
9NLB|1|R3|A|321
9NLB|1|R3|C|322
9NLB|1|R3|U|323
9NLB|1|R3|G|324
9NLB|1|R3|A|325
9NLB|1|R3|G|326
9NLB|1|R3|A|327
9NLB|1|R3|C|328
9NLB|1|R3|A|329
9NLB|1|R3|C|330
9NLB|1|R3|G|331
9NLB|1|R3|G|332
9NLB|1|R3|U|333
9NLB|1|R3|C|334

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sp

Small ribosomal subunit protein bS16

Chain st

30S ribosomal protein S20