HL_9NLB_087

3D structure

PDB id

9NLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCCCUUGAGGC

Length

11 nucleotides

Bulged bases

9NLB|1|R3|U|842

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLB|1|R3|G|838
9NLB|1|R3|C|839
9NLB|1|R3|C|840
9NLB|1|R3|C|841
9NLB|1|R3|U|842
9NLB|1|R3|U|843
9NLB|1|R3|G|844
9NLB|1|R3|A|845
9NLB|1|R3|G|846
9NLB|1|R3|G|847
9NLB|1|R3|C|848

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sb

Small ribosomal subunit protein uS2

Chain sr

30S ribosomal protein S18