HL_9NLE_002
3D structure
- PDB id
- 9NLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-EttA in Hydrolytic 1 conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGAUAUGAA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NLE_002 not in the Motif Atlas
- Homologous match to HL_5J7L_135
- Geometric discrepancy: 0.1474
- The information below is about HL_5J7L_135
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_80241.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9NLE|1|R1|U|87
9NLE|1|R1|G|88
9NLE|1|R1|A|89
9NLE|1|R1|U|90
9NLE|1|R1|A|91
9NLE|1|R1|U|92
9NLE|1|R1|G|93
9NLE|1|R1|A|94
9NLE|1|R1|A|95
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 23
- Large ribosomal subunit protein uL23
- Chain 24
- Large ribosomal subunit protein uL24
- Chain 29
- Large ribosomal subunit protein uL29
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