HL_9NLE_023

3D structure

PDB id

9NLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUCAUCCCGAC

Length

11 nucleotides

Bulged bases

9NLE|1|R1|C|888, 9NLE|1|R1|G|891

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLE|1|R1|G|883
9NLE|1|R1|U|884
9NLE|1|R1|C|885
9NLE|1|R1|A|886
9NLE|1|R1|U|887
9NLE|1|R1|C|888
9NLE|1|R1|C|889
9NLE|1|R1|C|890
9NLE|1|R1|G|891
9NLE|1|R1|A|892
9NLE|1|R1|C|893

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain sm

30S ribosomal protein S13

Chain ss

30S ribosomal protein S19