HL_9NLE_026

3D structure

PDB id

9NLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUGGCUUAGAAGCAGCCAUC

Length

21 nucleotides

Bulged bases

9NLE|1|R1|U|1061, 9NLE|1|R1|G|1063, 9NLE|1|R1|U|1065, 9NLE|1|R1|U|1066, 9NLE|1|R1|A|1070, 9NLE|1|R1|G|1074

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLE|1|R1|G|1059
9NLE|1|R1|U|1060
9NLE|1|R1|U|1061
9NLE|1|R1|G|1062
9NLE|1|R1|G|1063
9NLE|1|R1|C|1064
9NLE|1|R1|U|1065
9NLE|1|R1|U|1066
9NLE|1|R1|A|1067
9NLE|1|R1|G|1068
9NLE|1|R1|A|1069
9NLE|1|R1|A|1070
9NLE|1|R1|G|1071
9NLE|1|R1|C|1072
9NLE|1|R1|A|1073
9NLE|1|R1|G|1074
9NLE|1|R1|C|1075
9NLE|1|R1|C|1076
9NLE|1|R1|A|1077
9NLE|1|R1|U|1078
9NLE|1|R1|C|1079

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain 16

50S ribosomal protein L16