HL_9NLE_077

3D structure

PDB id

9NLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-EttA in Hydrolytic 1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAACUGAGACACGGUC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLE|1|R3|G|319
9NLE|1|R3|A|320
9NLE|1|R3|A|321
9NLE|1|R3|C|322
9NLE|1|R3|U|323
9NLE|1|R3|G|324
9NLE|1|R3|A|325
9NLE|1|R3|G|326
9NLE|1|R3|A|327
9NLE|1|R3|C|328
9NLE|1|R3|A|329
9NLE|1|R3|C|330
9NLE|1|R3|G|331
9NLE|1|R3|G|332
9NLE|1|R3|U|333
9NLE|1|R3|C|334

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sp

Small ribosomal subunit protein bS16

Chain st

30S ribosomal protein S20