HL_9NLF_024

3D structure

PDB id

9NLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-YbiT in Hydrolytic 2/PtIM(a) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGGGUCAUCCCGACUUAC

Length

18 nucleotides

Bulged bases

9NLF|1|R1|U|887, 9NLF|1|R1|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLF|1|R1|G|880
9NLF|1|R1|G|881
9NLF|1|R1|G|882
9NLF|1|R1|G|883
9NLF|1|R1|U|884
9NLF|1|R1|C|885
9NLF|1|R1|A|886
9NLF|1|R1|U|887
9NLF|1|R1|C|888
9NLF|1|R1|C|889
9NLF|1|R1|C|890
9NLF|1|R1|G|891
9NLF|1|R1|A|892
9NLF|1|R1|C|893
9NLF|1|R1|U|894
9NLF|1|R1|U|895
9NLF|1|R1|A|896
9NLF|1|R1|C|897

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain sm

30S ribosomal protein S13

Chain ss

30S ribosomal protein S19