HL_9NLF_089

3D structure

PDB id

9NLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-YbiT in Hydrolytic 2/PtIM(a) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

9NLF|1|R3|C|841, 9NLF|1|R3|U|842, 9NLF|1|R3|U|843, 9NLF|1|R3|G|844, 9NLF|1|R3|A|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLF|1|R3|C|840
9NLF|1|R3|C|841
9NLF|1|R3|U|842
9NLF|1|R3|U|843
9NLF|1|R3|G|844
9NLF|1|R3|A|845
9NLF|1|R3|G|846

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sb

Small ribosomal subunit protein uS2

Chain sr

30S ribosomal protein S18