HL_9NLH_081

3D structure

PDB id

9NLH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli Initiation complex with YheS-EQ2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

9NLH|1|R3|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9NLH_081 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2513

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

9NLH|1|R3|G|462
9NLH|1|R3|U|463
9NLH|1|R3|U|464
9NLH|1|R3|A|465
9NLH|1|R3|A|466
9NLH|1|R3|U|467
9NLH|1|R3|A|468
9NLH|1|R3|C|469
9NLH|1|R3|C|470

Current chains

Chain R3

16S ribosomal RNA

Nearby chains