HL_9NLJ_065
3D structure
- PDB id
- 9NLJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli Initiation complex with Uup-EQ2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUUAAG
- Length
- 7 nucleotides
- Bulged bases
- 9NLJ|1|R1|U|2797, 9NLJ|1|R1|U|2798, 9NLJ|1|R1|A|2800
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9NLJ_065 not in the Motif Atlas
- Homologous match to HL_5J7L_200
- Geometric discrepancy: 0.4959
- The information below is about HL_5J7L_200
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_08100.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9NLJ|1|R1|C|2795
9NLJ|1|R1|U|2796
9NLJ|1|R1|U|2797
9NLJ|1|R1|U|2798
9NLJ|1|R1|A|2799
9NLJ|1|R1|A|2800
9NLJ|1|R1|G|2801
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: