HL_9NLQ_024

3D structure

PDB id

9NLQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-YbiT in Hydrolytic 1/PtIM(a) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUCAUCCCGAC

Length

11 nucleotides

Bulged bases

9NLQ|1|R1|U|887, 9NLQ|1|R1|G|891

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLQ|1|R1|G|883
9NLQ|1|R1|U|884
9NLQ|1|R1|C|885
9NLQ|1|R1|A|886
9NLQ|1|R1|U|887
9NLQ|1|R1|C|888
9NLQ|1|R1|C|889
9NLQ|1|R1|C|890
9NLQ|1|R1|G|891
9NLQ|1|R1|A|892
9NLQ|1|R1|C|893

Current chains

Chain R1

23S ribosomal RNA

Nearby chains

Chain sm

30S ribosomal protein S13