HL_9NLQ_027

3D structure

PDB id

9NLQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-YbiT in Hydrolytic 1/PtIM(a) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AUGUUGGCUUAGAAGCAGCCAUCAUU

Length

26 nucleotides

Bulged bases

9NLQ|1|R1|U|1061, 9NLQ|1|R1|U|1065, 9NLQ|1|R1|U|1066, 9NLQ|1|R1|A|1070, 9NLQ|1|R1|C|1079

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLQ|1|R1|A|1057
9NLQ|1|R1|U|1058
9NLQ|1|R1|G|1059
9NLQ|1|R1|U|1060
9NLQ|1|R1|U|1061
9NLQ|1|R1|G|1062
9NLQ|1|R1|G|1063
9NLQ|1|R1|C|1064
9NLQ|1|R1|U|1065
9NLQ|1|R1|U|1066
9NLQ|1|R1|A|1067
9NLQ|1|R1|G|1068
9NLQ|1|R1|A|1069
9NLQ|1|R1|A|1070
9NLQ|1|R1|G|1071
9NLQ|1|R1|C|1072
9NLQ|1|R1|A|1073
9NLQ|1|R1|G|1074
9NLQ|1|R1|C|1075
9NLQ|1|R1|C|1076
9NLQ|1|R1|A|1077
9NLQ|1|R1|U|1078
9NLQ|1|R1|C|1079
9NLQ|1|R1|A|1080
9NLQ|1|R1|U|1081
9NLQ|1|R1|U|1082

Current chains

Chain R1

23S ribosomal RNA

Nearby chains