HL_9NLS_093

3D structure

PDB id

9NLS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli initiation complex with EQ2-YbiT in Intermediate/PtIM(b) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

9NLS|1|R3|C|1028, 9NLS|1|R3|U|1029, 9NLS|1|R3|C|1031, 9NLS|1|R3|G|1032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NLS|1|R3|C|1027
9NLS|1|R3|C|1028
9NLS|1|R3|U|1029
9NLS|1|R3|U|1030
9NLS|1|R3|C|1031
9NLS|1|R3|G|1032
9NLS|1|R3|G|1033
9NLS|1|R3|G|1034

Current chains

Chain R3

16S ribosomal RNA

Nearby chains