HL_9O2X_031
3D structure
- PDB id
- 9O2X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- CCGGCG
- Length
- 6 nucleotides
- Bulged bases
- 9O2X|1|Y|G|17, 9O2X|1|Y|G|18, 9O2X|1|Y|C|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9O2X_031 not in the Motif Atlas
- Geometric match to HL_8GLP_006
- Geometric discrepancy: 0.1769
- The information below is about HL_8GLP_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.9
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
9O2X|1|Y|C|13
9O2X|1|Y|C|15
9O2X|1|Y|G|17
9O2X|1|Y|G|18
9O2X|1|Y|C|20
9O2X|1|Y|G|22
Current chains
- Chain Y
- A-site tRNAPyl
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: