HL_9O2Y_019

3D structure

PDB id

9O2Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl

Experimental method

ELECTRON MICROSCOPY

Resolution

2.14 Å

Loop

Sequence

GAU(2MG)(5MC)AACGC

Length

10 nucleotides

Bulged bases

9O2Y|1|A|G|971

QA status

Modified nucleotides: 2MG, 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O2Y|1|A|G|963
9O2Y|1|A|A|964
9O2Y|1|A|U|965
9O2Y|1|A|2MG|966
9O2Y|1|A|5MC|967
9O2Y|1|A|A|968
9O2Y|1|A|A|969
9O2Y|1|A|C|970
9O2Y|1|A|G|971
9O2Y|1|A|C|972

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

Small ribosomal subunit protein uS9

Chain J

Small ribosomal subunit protein uS10

Chain Y

A-site tRNAPyl

Chain Z

Transfer RNA; tRNA