HL_9O2Y_073

3D structure

PDB id

9O2Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl

Experimental method

ELECTRON MICROSCOPY

Resolution

2.14 Å

Loop

Sequence

AGAGAAU

Length

7 nucleotides

Bulged bases

9O2Y|1|a|A|1634

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9O2Y_073 not in the Motif Atlas

Geometric match to HL_8B0X_069

Geometric discrepancy: 0.045

The information below is about HL_8B0X_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

9O2Y|1|a|A|1630
9O2Y|1|a|G|1631
9O2Y|1|a|A|1632
9O2Y|1|a|G|1633
9O2Y|1|a|A|1634
9O2Y|1|a|A|1635
9O2Y|1|a|U|1636

Current chains

Chain a

23S rRNA

Nearby chains