HL_9O2Y_082

3D structure

PDB id

9O2Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl

Experimental method

ELECTRON MICROSCOPY

Resolution

2.14 Å

Loop

Sequence

GUG(6MZ)AGAUGC

Length

10 nucleotides

Bulged bases

9O2Y|1|a|6MZ|2030, 9O2Y|1|a|A|2031, 9O2Y|1|a|G|2032

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O2Y|1|a|G|2027
9O2Y|1|a|U|2028
9O2Y|1|a|G|2029
9O2Y|1|a|6MZ|2030
9O2Y|1|a|A|2031
9O2Y|1|a|G|2032
9O2Y|1|a|A|2033
9O2Y|1|a|U|2034
9O2Y|1|a|G|2035
9O2Y|1|a|C|2036

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain q

Large ribosomal subunit protein bL21

Chain z

50S ribosomal protein L32