HL_9O2Y_084

3D structure

PDB id

9O2Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl

Experimental method

ELECTRON MICROSCOPY

Resolution

2.14 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

9O2Y|1|a|G|2250

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O2Y|1|a|C|2248
9O2Y|1|a|U|2249
9O2Y|1|a|G|2250
9O2Y|1|a|OMG|2251
9O2Y|1|a|G|2252
9O2Y|1|a|G|2253
9O2Y|1|a|C|2254
9O2Y|1|a|G|2255
9O2Y|1|a|G|2256

Current chains

Chain a

23S rRNA

Nearby chains

Chain Z

Transfer RNA; tRNA

Chain l

50S ribosomal protein L16

Chain v

Large ribosomal subunit protein bL27