HL_9O2Y_098

3D structure

PDB id

9O2Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl

Experimental method

ELECTRON MICROSCOPY

Resolution

2.14 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

9O2Y|1|a|U|2797, 9O2Y|1|a|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9O2Y_098 not in the Motif Atlas

Geometric match to HL_8P9A_179

Geometric discrepancy: 0.2648

The information below is about HL_8P9A_179

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_58375.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

9O2Y|1|a|C|2795
9O2Y|1|a|U|2796
9O2Y|1|a|U|2797
9O2Y|1|a|U|2798
9O2Y|1|a|A|2799
9O2Y|1|a|A|2800
9O2Y|1|a|G|2801

Current chains

Chain a

23S rRNA

Nearby chains