3D structure

PDB id
9O3I (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
CGAACAG
Length
7 nucleotides
Bulged bases
9O3I|1|2A|C|645
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_9O3I_126 not in the Motif Atlas
Geometric match to HL_9DFE_019
Geometric discrepancy: 0.2234
The information below is about HL_9DFE_019
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

9O3I|1|2A|C|641
9O3I|1|2A|G|642
9O3I|1|2A|A|643
9O3I|1|2A|A|644
9O3I|1|2A|C|645
9O3I|1|2A|A|646
9O3I|1|2A|G|647

Current chains

Chain 2A
23S Ribosomal RNA

Nearby chains

Chain 26
50S ribosomal protein L33
Chain 28
50S ribosomal protein L35
Chain 2P
50S ribosomal protein L15

Coloring options:


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