HL_9O3I_131

3D structure

PDB id

9O3I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGGGCCCACCAGCCUAC

Length

17 nucleotides

Bulged bases

9O3I|1|2A|C|888, 9O3I|1|2A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3I|1|2A|G|880
9O3I|1|2A|G|881
9O3I|1|2A|G|882
9O3I|1|2A|G|883
9O3I|1|2A|C|884
9O3I|1|2A|C|885
9O3I|1|2A|C|886
9O3I|1|2A|A|887
9O3I|1|2A|C|888
9O3I|1|2A|C|889
9O3I|1|2A|A|890
9O3I|1|2A|G|892
9O3I|1|2A|C|893
9O3I|1|2A|C|894
9O3I|1|2A|U|895
9O3I|1|2A|A|896
9O3I|1|2A|C|897

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Z

50S ribosomal protein L25

Chain 2m

30S ribosomal protein S13

Chain 2w

Transfer RNA; tRNA