HL_9O3J_038
3D structure
- PDB id
- 9O3J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type drug-free Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CGACACAG
- Length
- 8 nucleotides
- Bulged bases
- 9O3J|1|1A|A|1616, 9O3J|1|1A|A|1618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9O3J_038 not in the Motif Atlas
- Geometric match to HL_9DFE_038
- Geometric discrepancy: 0.0819
- The information below is about HL_9DFE_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_28592.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
9O3J|1|1A|C|1612
9O3J|1|1A|G|1613
9O3J|1|1A|A|1614
9O3J|1|1A|C|1615
9O3J|1|1A|A|1616
9O3J|1|1A|C|1617
9O3J|1|1A|A|1618
9O3J|1|1A|G|1619
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 17
- 50S ribosomal protein L34
- Chain 1W
- 50S ribosomal protein L22
Coloring options: