HL_9O3J_073

3D structure

PDB id

9O3J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type drug-free Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GCUUUGC

Length

7 nucleotides

Bulged bases

9O3J|1|1a|U|202, 9O3J|1|1a|U|203, 9O3J|1|1a|U|204

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9O3J_073 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.2928

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

9O3J|1|1a|G|200
9O3J|1|1a|C|201
9O3J|1|1a|U|202
9O3J|1|1a|U|203
9O3J|1|1a|U|204
9O3J|1|1a|G|216
9O3J|1|1a|C|217

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains