HL_9O3J_169
3D structure
- PDB id
- 9O3J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type drug-free Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GAAGACCAC
- Length
- 9 nucleotides
- Bulged bases
- 9O3J|1|2A|A|2820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9O3J_169 not in the Motif Atlas
- Geometric match to HL_9DFE_065
- Geometric discrepancy: 0.0657
- The information below is about HL_9DFE_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37889.1
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9O3J|1|2A|G|2819
9O3J|1|2A|A|2820
9O3J|1|2A|A|2821
9O3J|1|2A|G|2822
9O3J|1|2A|A|2823
9O3J|1|2A|C|2824
9O3J|1|2A|C|2825
9O3J|1|2A|A|2826
9O3J|1|2A|C|2827
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 25
- 50S ribosomal protein L32
- Chain 2E
- 50S ribosomal protein L3
- Chain 2R
- 50S ribosomal protein L17
- Chain 2T
- 50S ribosomal protein L19
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