HL_9O3V_091

3D structure

PDB id

9O3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome stalled on MYC nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GACUCUUUCGAGGCC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3V|1|S2|G|535
9O3V|1|S2|A|536
9O3V|1|S2|C|537
9O3V|1|S2|U|538
9O3V|1|S2|C|539
9O3V|1|S2|U|540
9O3V|1|S2|U|541
9O3V|1|S2|U|542
9O3V|1|S2|C|543
9O3V|1|S2|G|544
9O3V|1|S2|A|545
9O3V|1|S2|G|546
9O3V|1|S2|G|547
9O3V|1|S2|C|548
9O3V|1|S2|C|549

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SJ

Small ribosomal subunit protein uS4

Chain Se

FAU ubiquitin-like and ribosomal protein S30