3D structure

PDB id
9O3V (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human 80S ribosome stalled on MYC nascent chain
Experimental method
ELECTRON MICROSCOPY
Resolution
2.2 Å

Loop

Sequence
UAUUUUGUUGGUUUUCG
Length
17 nucleotides
Bulged bases
9O3V|1|S2|G|891, 9O3V|1|S2|U|892, 9O3V|1|S2|U|897
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9O3V|1|S2|U|885
9O3V|1|S2|A|886
9O3V|1|S2|U|887
9O3V|1|S2|U|888
9O3V|1|S2|U|889
9O3V|1|S2|U|890
9O3V|1|S2|G|891
9O3V|1|S2|U|892
9O3V|1|S2|U|893
9O3V|1|S2|G|894
9O3V|1|S2|G|895
9O3V|1|S2|U|896
9O3V|1|S2|U|897
9O3V|1|S2|U|898
9O3V|1|S2|U|899
9O3V|1|S2|C|900
9O3V|1|S2|G|901

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SG
Small ribosomal subunit protein eS6

Coloring options:

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