HL_9O3W_035
3D structure
- PDB id
- 9O3W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.9 Å
Loop
- Sequence
- GUUCAGAUCC
- Length
- 10 nucleotides
- Bulged bases
- 9O3W|1|L5|U|2530, 9O3W|1|L5|C|2531
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9O3W_035 not in the Motif Atlas
- Homologous match to HL_8GLP_038
- Geometric discrepancy: 0.0514
- The information below is about HL_8GLP_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77449.3
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9O3W|1|L5|G|2523
9O3W|1|L5|U|2524
9O3W|1|L5|U|2525
9O3W|1|L5|C|2526
9O3W|1|L5|A|2527
9O3W|1|L5|G|2528
9O3W|1|L5|A|2529
9O3W|1|L5|U|2530
9O3W|1|L5|C|2531
9O3W|1|L5|C|2532
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LR
- Large ribosomal subunit protein eL19
- Chain LX
- Large ribosomal subunit protein uL23
- Chain Lg
- Large ribosomal subunit protein eL34
- Chain Ll
- Large ribosomal subunit protein eL39
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